Usage Reference for `pyvisfile.silo`¶

pyvisfile.silo.get_silo_version()¶

pyvisfile.silo.set_deprecate_warnings(max)¶: Silo 4.6.1 or newer only.

Database file object¶

class pyvisfile.silo.SiloFile¶

close()¶

get_toc()¶: Returns a DBToc instance.

get_curve(name)¶: Returns a DBCurve instance.

get_quadmesh(name)¶: Returns a DBQuadMesh instance.

get_quadvar(name)¶: Returns a DBQuadVar instance.

put_curve(curvename, xvals, yvals, optlist={})¶

put_defvars(vname, vars)¶

Add an defined variable (“expression”) to this database.

The vars argument consists of a list of tuples of type: (name, definition)
or: (name, definition, DB_VARTYPE_SCALAR | DB_VARTYPE_VECTOR)
or even: (name, definition, DB_VARTYPE_XXX, {options}).

If the type is not specified, scalar is assumed.

put_multimesh(mname, mnames_and_types, optlist={})¶

put_multivar(vname, vnames_and_types, optlist={})¶

put_pointmesh(mname, coords, optlist={})¶

put_pointvar(vname, mname, vars, optlist={})¶

put_pointvar1(vname, mname, var, optlist={})¶

put_quadmesh(mname, coords, coordtype=130, optlist={})¶

put_quadvar(vname, mname, varnames, vars, dims, centering, optlist={})¶

put_quadvar1(vname, mname, var, dims, centering, optlist={})¶

put_ucdmesh(mname, coordnames, coords, nzones, zonel_name, facel_name, optlist={})¶

put_ucdvar(vname, mname, varnames, vars, centering, optlist={})¶

put_ucdvar1(vname, mname, vec, centering, optlist={})¶

put_zonelist_2(names, nzones, ndims, nodelist, lo_offset, hi_offset, shapetype, shapesize, shapecounts, optlist={})¶

Support for Parallel Computation¶

class pyvisfile.silo.ParallelSiloFile(pathname, rank, ranks, *args, **kwargs)¶

A SiloFile that automatically creates a parallel master file.

This class is meant to be instantiated on every rank of an MPI computation. It creates one data file per rank, and it automatically chooses a rank that writes a master file.

The contents of the master file is automatically built, without any further user intervention.

A .silo extension is automatically appended to pathname for the master file, as are rank numbers and the extension for each individual rank.

This class can be used in a Python 2.5 with statement.

close()¶

put_defvars(vname, vars)¶

Add an defined variable (“expression”) to this database.

The vars argument consists of a list of tuples of type: (name, definition)
or: (name, definition, DB_VARTYPE_SCALAR | DB_VARTYPE_VECTOR).
or even: (name, definition, DB_VARTYPE_XXX, {options}).

If the type is not specified, scalar is assumed.

put_pointmesh(mname, coords, optlist={})¶

put_pointvar(vname, mname, vars, optlist={})¶

put_pointvar1(vname, mname, var, optlist={})¶

put_quadmesh(mname, coords, coordtype=130, optlist={})¶

put_quadvar(vname, mname, varnames, vars, dims, centering, optlist={})¶

put_quadvar1(vname, mname, var, dims, centering, optlist={})¶

put_ucdmesh(mname, coordnames, coords, nzones, zonel_name, facel_name, optlist)¶

put_ucdvar(vname, mname, varnames, vars, centering, optlist={})¶

put_ucdvar1(vname, mname, vec, centering, optlist={})¶

put_zonelist(*args, **kwargs)¶

put_zonelist_2(*args, **kwargs)¶

Supporting Objects¶

class pyvisfile.silo.IntVector¶

append(val)¶

extend(iterable)¶

reserve(count)¶

Data objects¶

class pyvisfile.silo.DBToc¶

array_names¶

csgmesh_names¶

csgvar_names¶

curve_names¶

defvars_names¶

dir_names¶

groupelmap_names¶

mat_names¶

matspecies_names¶

mrgtree_names¶

mrgvar_names¶

multimat_names¶

multimatspecies_names¶

multimesh_names¶

multimeshadj_names¶

multivar_names¶

obj_names¶

ptmesh_names¶

ptvar_names¶

qmesh_names¶

qvar_names¶

ucdmesh_names¶

ucdvar_names¶

var_names¶

class pyvisfile.silo.DBCurve¶

id¶

origin¶

reference¶

title¶

x¶

xlabel¶

xunits¶

xvarname¶

y¶

ylabel¶

yunits¶

yvarname¶

class pyvisfile.silo.DBQuadMesh¶

base_index¶

block_no¶

coord_sys¶

coords¶

coordtype¶

cycle¶

dtime¶

facetype¶

group_no¶

guihide¶

id¶

labels¶

major_order¶

max_extents¶

max_index¶

min_extents¶

min_index¶

mrgtree_name¶

name¶

ndims¶

nnodes¶

nspace¶

origin¶

planar¶

size_index¶

start_index¶

stride¶

time¶

units¶

class pyvisfile.silo.DBQuadVar¶

align¶

ascii_labels¶

cycle¶

dtime¶

guihide¶

id¶

label¶

major_order¶

max_index¶

meshid¶

meshname¶

min_index¶

mixlen¶

name¶

ndims¶

nels¶

nvals¶

origin¶

stride¶

time¶

units¶

use_specmf¶

vals¶

Constants¶

Drivers¶

pyvisfile.silo.DB_NETCDF¶

pyvisfile.silo.DB_PDB¶

pyvisfile.silo.DB_TAURUS¶

pyvisfile.silo.DB_UNKNOWN¶

pyvisfile.silo.DB_DEBUG¶

pyvisfile.silo.DB_HDF5¶

The below entries only work for Silo 4.6.1 and newer.

pyvisfile.silo.DB_HDF5_SEC2¶

pyvisfile.silo.DB_HDF5_STDIO¶

pyvisfile.silo.DB_HDF5_CORE¶

pyvisfile.silo.DB_HDF5_MPIO¶

pyvisfile.silo.DB_HDF5_MPIOP¶

Flags for DBCreate¶

pyvisfile.silo.DB_CLOBBER¶

pyvisfile.silo.DB_NOCLOBBER¶

Flags for DBOpen¶

pyvisfile.silo.DB_READ¶

pyvisfile.silo.DB_APPEND¶

Target machine for DBCreate¶

pyvisfile.silo.DB_LOCAL¶

pyvisfile.silo.DB_SUN3¶

pyvisfile.silo.DB_SUN4¶

pyvisfile.silo.DB_SGI¶

pyvisfile.silo.DB_RS6000¶

pyvisfile.silo.DB_CRAY¶

pyvisfile.silo.DB_INTEL¶

Options¶

pyvisfile.silo.DBOPT_ALIGN¶

pyvisfile.silo.DBOPT_COORDSYS¶

pyvisfile.silo.DBOPT_CYCLE¶

pyvisfile.silo.DBOPT_FACETYPE¶

pyvisfile.silo.DBOPT_HI_OFFSET¶

pyvisfile.silo.DBOPT_LO_OFFSET¶

pyvisfile.silo.DBOPT_LABEL¶

pyvisfile.silo.DBOPT_XLABEL¶

pyvisfile.silo.DBOPT_YLABEL¶

pyvisfile.silo.DBOPT_ZLABEL¶

pyvisfile.silo.DBOPT_MAJORORDER¶

pyvisfile.silo.DBOPT_NSPACE¶

pyvisfile.silo.DBOPT_ORIGIN¶

pyvisfile.silo.DBOPT_PLANAR¶

pyvisfile.silo.DBOPT_TIME¶

pyvisfile.silo.DBOPT_UNITS¶

pyvisfile.silo.DBOPT_XUNITS¶

pyvisfile.silo.DBOPT_YUNITS¶

pyvisfile.silo.DBOPT_ZUNITS¶

pyvisfile.silo.DBOPT_DTIME¶

pyvisfile.silo.DBOPT_USESPECMF¶

pyvisfile.silo.DBOPT_XVARNAME¶

pyvisfile.silo.DBOPT_YVARNAME¶

pyvisfile.silo.DBOPT_ZVARNAME¶

pyvisfile.silo.DBOPT_ASCII_LABEL¶

pyvisfile.silo.DBOPT_MATNOS¶

pyvisfile.silo.DBOPT_NMATNOS¶

pyvisfile.silo.DBOPT_MATNAME¶

pyvisfile.silo.DBOPT_NMAT¶

pyvisfile.silo.DBOPT_NMATSPEC¶

pyvisfile.silo.DBOPT_BASEINDEX¶

pyvisfile.silo.DBOPT_ZONENUM¶

pyvisfile.silo.DBOPT_NODENUM¶

pyvisfile.silo.DBOPT_BLOCKORIGIN¶

pyvisfile.silo.DBOPT_GROUPNUM¶

pyvisfile.silo.DBOPT_GROUPORIGIN¶

pyvisfile.silo.DBOPT_NGROUPS¶

pyvisfile.silo.DBOPT_MATNAMES¶

pyvisfile.silo.DBOPT_EXTENTS_SIZE¶

pyvisfile.silo.DBOPT_EXTENTS¶

pyvisfile.silo.DBOPT_MATCOUNTS¶

pyvisfile.silo.DBOPT_MATLISTS¶

pyvisfile.silo.DBOPT_MIXLENS¶

pyvisfile.silo.DBOPT_ZONECOUNTS¶

pyvisfile.silo.DBOPT_HAS_EXTERNAL_ZONES¶

pyvisfile.silo.DBOPT_PHZONELIST¶

pyvisfile.silo.DBOPT_MATCOLORS¶

pyvisfile.silo.DBOPT_BNDNAMES¶

pyvisfile.silo.DBOPT_REGNAMES¶

pyvisfile.silo.DBOPT_ZONENAMES¶

pyvisfile.silo.DBOPT_HIDE_FROM_GUI¶

Error trapping method¶

pyvisfile.silo.DB_TOP¶

pyvisfile.silo.DB_NONE¶

pyvisfile.silo.DB_ALL¶

pyvisfile.silo.DB_ABORT¶

pyvisfile.silo.DB_SUSPEND¶

pyvisfile.silo.DB_RESUME¶

Errors¶

pyvisfile.silo.E_NOERROR¶

pyvisfile.silo.E_BADFTYPE¶

pyvisfile.silo.E_NOTIMP¶

pyvisfile.silo.E_NOFILE¶

pyvisfile.silo.E_INTERNAL¶

pyvisfile.silo.E_NOMEM¶

pyvisfile.silo.E_BADARGS¶

pyvisfile.silo.E_CALLFAIL¶

pyvisfile.silo.E_NOTFOUND¶

pyvisfile.silo.E_TAURSTATE¶

pyvisfile.silo.E_MSERVER¶

pyvisfile.silo.E_PROTO¶

pyvisfile.silo.E_NOTDIR¶

pyvisfile.silo.E_MAXOPEN¶

pyvisfile.silo.E_NOTFILTER¶

pyvisfile.silo.E_MAXFILTERS¶

pyvisfile.silo.E_FEXIST¶

pyvisfile.silo.E_FILEISDIR¶

pyvisfile.silo.E_FILENOREAD¶

pyvisfile.silo.E_SYSTEMERR¶

pyvisfile.silo.E_FILENOWRITE¶

pyvisfile.silo.E_INVALIDNAME¶

pyvisfile.silo.E_NOOVERWRITE¶

pyvisfile.silo.E_CHECKSUM¶

pyvisfile.silo.E_NERRORS¶

Definitions for MAJOR_ORDER¶

pyvisfile.silo.DB_ROWMAJOR¶

pyvisfile.silo.DB_COLMAJOR¶

Definitions for COORD_TYPE¶

pyvisfile.silo.DB_COLLINEAR¶

pyvisfile.silo.DB_NONCOLLINEAR¶

pyvisfile.silo.DB_QUAD_RECT¶

pyvisfile.silo.DB_QUAD_CURV¶

Definitions for CENTERING¶

pyvisfile.silo.DB_NOTCENT¶

pyvisfile.silo.DB_NODECENT¶

pyvisfile.silo.DB_ZONECENT¶

pyvisfile.silo.DB_FACECENT¶

pyvisfile.silo.DB_BNDCENT¶

Definitions for COORD_SYSTEM¶

pyvisfile.silo.DB_CARTESIAN¶

pyvisfile.silo.DB_CYLINDRICAL¶

pyvisfile.silo.DB_SPHERICAL¶

pyvisfile.silo.DB_NUMERICAL¶

pyvisfile.silo.DB_OTHER¶

Definitions for ZONE FACE_TYPE¶

pyvisfile.silo.DB_RECTILINEAR¶

pyvisfile.silo.DB_CURVILINEAR¶

Definitions for PLANAR¶

pyvisfile.silo.DB_AREA¶

pyvisfile.silo.DB_VOLUME¶

Definitions for flag values¶

pyvisfile.silo.DB_ON¶

pyvisfile.silo.DB_OFF¶

Definitions for derived variable types¶

pyvisfile.silo.DB_VARTYPE_SCALAR¶

pyvisfile.silo.DB_VARTYPE_VECTOR¶

pyvisfile.silo.DB_VARTYPE_TENSOR¶

pyvisfile.silo.DB_VARTYPE_SYMTENSOR¶

pyvisfile.silo.DB_VARTYPE_ARRAY¶

pyvisfile.silo.DB_VARTYPE_MATERIAL¶

pyvisfile.silo.DB_VARTYPE_SPECIES¶

pyvisfile.silo.DB_VARTYPE_LABEL¶

Definitions for CSG boundary types¶

pyvisfile.silo.DBCSG_QUADRIC_G¶

pyvisfile.silo.DBCSG_SPHERE_PR¶

pyvisfile.silo.DBCSG_ELLIPSOID_PRRR¶

pyvisfile.silo.DBCSG_PLANE_G¶

pyvisfile.silo.DBCSG_PLANE_X¶

pyvisfile.silo.DBCSG_PLANE_Y¶

pyvisfile.silo.DBCSG_PLANE_Z¶

pyvisfile.silo.DBCSG_PLANE_PN¶

pyvisfile.silo.DBCSG_PLANE_PPP¶

pyvisfile.silo.DBCSG_CYLINDER_PNLR¶

pyvisfile.silo.DBCSG_CYLINDER_PPR¶

pyvisfile.silo.DBCSG_BOX_XYZXYZ¶

pyvisfile.silo.DBCSG_CONE_PNLA¶

pyvisfile.silo.DBCSG_CONE_PPA¶

pyvisfile.silo.DBCSG_POLYHEDRON_KF¶

pyvisfile.silo.DBCSG_HEX_6F¶

pyvisfile.silo.DBCSG_TET_4F¶

pyvisfile.silo.DBCSG_PYRAMID_5F¶

pyvisfile.silo.DBCSG_PRISM_5F¶

Definitions for 2D CSG boundary types¶

pyvisfile.silo.DBCSG_QUADRATIC_G¶

pyvisfile.silo.DBCSG_CIRCLE_PR¶

pyvisfile.silo.DBCSG_ELLIPSE_PRR¶

pyvisfile.silo.DBCSG_LINE_G¶

pyvisfile.silo.DBCSG_LINE_X¶

pyvisfile.silo.DBCSG_LINE_Y¶

pyvisfile.silo.DBCSG_LINE_PN¶

pyvisfile.silo.DBCSG_LINE_PP¶

pyvisfile.silo.DBCSG_BOX_XYXY¶

pyvisfile.silo.DBCSG_ANGLE_PNLA¶

pyvisfile.silo.DBCSG_ANGLE_PPA¶

pyvisfile.silo.DBCSG_POLYGON_KP¶

pyvisfile.silo.DBCSG_TRI_3P¶

pyvisfile.silo.DBCSG_QUAD_4P¶

Definitions for CSG Region operators¶

pyvisfile.silo.DBCSG_INNER¶

pyvisfile.silo.DBCSG_OUTER¶

pyvisfile.silo.DBCSG_ON¶

pyvisfile.silo.DBCSG_UNION¶

pyvisfile.silo.DBCSG_INTERSECT¶

pyvisfile.silo.DBCSG_DIFF¶

pyvisfile.silo.DBCSG_COMPLIMENT¶

pyvisfile.silo.DBCSG_XFORM¶

pyvisfile.silo.DBCSG_SWEEP¶

Shape types¶

These constants only work for Silo 4.6.1 and newer.

pyvisfile.silo.DB_ZONETYPE_BEAM¶

pyvisfile.silo.DB_ZONETYPE_TRIANGLE¶

pyvisfile.silo.DB_ZONETYPE_QUAD¶

pyvisfile.silo.DB_ZONETYPE_POLYHEDRON¶

pyvisfile.silo.DB_ZONETYPE_TET¶

pyvisfile.silo.DB_ZONETYPE_PYRAMID¶

pyvisfile.silo.DB_ZONETYPE_PRISM¶

pyvisfile.silo.DB_ZONETYPE_HEX¶

Data types¶

class pyvisfile.silo.DBdatatype¶

DB_INT¶

DB_SHORT¶

DB_LONG¶

DB_LONG_LONG¶

DB_FLOAT¶

DB_DOUBLE¶

DB_CHAR¶

DB_NOTYPE¶

Object types¶

class pyvisfile.silo.DBObjectType¶

DB_INVALID_OBJECT¶

DB_QUADMESH¶

DB_QUADVAR¶

DB_UCDMESH¶

DB_UCDVAR¶

DB_MULTIMESH¶

DB_MULTIVAR¶

DB_MULTIMAT¶

DB_MULTIMATSPECIES¶

DB_MULTIBLOCKMESH¶

DB_MULTIBLOCKVAR¶

DB_MULTIMESHADJ¶

DB_MATERIAL¶

DB_MATSPECIES¶

DB_FACELIST¶

DB_ZONELIST¶

DB_EDGELIST¶

DB_PHZONELIST¶

DB_CSGZONELIST¶

DB_CSGMESH¶

DB_CSGVAR¶

DB_CURVE¶

DB_DEFVARS¶

DB_POINTMESH¶

DB_POINTVAR¶

DB_ARRAY¶

DB_DIR¶

DB_VARIABLE¶

DB_USERDEF¶

Usage Reference for pyvisfile.silo¶